Wang, T., Zhao, R., Zhi, J., Liu, Z., Wu, A., Yang, Z., Wang, W., Ni, T., Jing, L., and Yu, M. (2023) Tox4 regulates transcriptional elongation and reinitiation during murine T cell development, Communications Biology 6, 613. doi: 10.1038/ s42003-023-04992-y.

Liu, Z., Wu, A., Wu, Z., Wang, T., Pan, Y., Li, B., Zhang, X., and Yu, M. (2022) TOX4 facilitates promoter-proximal pausing and C-terminal domain dephosphorylation of RNA polymerase II in human cells. Commun Biol. Apr 1;5(1):300. doi: 10.1038/s42003-022-03214-1.

Wu, A., Zhi, J., Tian, T., Cihan, A., Cevher, M., Liu, Z., David, Y., Muir, T.W., Roeder, R.G., and Yu, M. (2021) DOT1L complex regulates transcriptional initiation in human erythroleukemic cells. Proc Natl Acad Sci U S A 118(27) e2106148118.

Pei, T. T., Li, H., Liang, X., Wang, Z. H., Liu, G., Wu, L. L., Kim, H., Xie, Z., Yu, M., Lin, S., Xu, P., and Dong, T. G. (2020) Intramolecular chaperone-mediated secretion of an Rhs effector toxin by a type VI secretion system, Nat Commun 11, 1865.

Yu, M., Yang, W., Ni, T., Tang, Z., Nakadai, T., Zhu, J., and Roeder, R.G. (2015) RNA polymerase II-associated factor 1 regulates the release and phosphorylation of paused RNA polymerase II. Science 350, 1383-1386. 

Wang, E., Kawaoka, S., Yu, M., Shi, J., Ni, T., Yang, W., Zhu, J., Roeder, R. G., and Vakoc, C. R. (2013) Histone H2B ubiquitin ligase RNF20 is required for MLL-rearranged leukemia, Proc Natl Acad Sci U S A 110, 3901-3906. 

Yu, M., Mazor, T., Huang, H., Huang, H. T., Kathrein, K. L., Woo, A. J., Chouinard, C. R., Labadorf, A., Akie, T. E., Moran, T. B., Xie, H., Zacharek, S., Taniuchi, I., Roeder, R. G., Kim, C. F., Zon, L. I., Fraenkel, E., and Cantor, A. B. (2012) Direct recruitment of polycomb repressive complex 1 to chromatin by core binding transcription factors, Mol Cell 45, 330-343. 

Amigo, J. D., Yu, M., Troadec, M. B., Gwynn, B., Cooney, J. D., Lambert, A. J., Chi, N. C., Weiss, M. J., Peters, L. L., Kaplan, J., Cantor, A. B., and Paw, B. H. (2011) Identification of Distal cis-Regulatory Elements at Mouse Mitoferrin Loci Using Zebrafish Transgenesis, Mol Cell Biol 31, 1344-1356. 

Yu, M., Riva, L., Xie, H., Schindler, Y., Moran, T. B., Cheng, Y., Yu, D., Hardison, R., Weiss, M. J., Orkin, S. H., Bernstein, B. E., Fraenkel, E., and Cantor, A. B. (2009) Insights into GATA-1-Mediated Gene Activation versus Repression via Genome-wide Chromatin Occupancy Analysis, Mol Cell 36, 682-695. 

Huang, H., Yu, M., Akie, T. E., Moran, T. B., Woo, A. J., Tu, N., Waldon, Z., Lin, Y. Y., Steen, H., and Cantor, A. B. (2009) Differentiation-dependent interactions between RUNX-1 and FLI-1 during megakaryocyte development, Mol Cell Biol 29, 4103-4115.