J. Q. Jiang and M. Wu* (2012) Predicting Multiplex Subcellular Localization of Proteins using Protein-Protein Interaction Network: A Comparative Study. BMC Bioinformatics.

F. Qin, Y. Jiang, Y. Chen, M. Wu, G. Yan, W. Ye, Y. X. Li, J. Zhang, H. Chen* (2011) Conformational Selection or Induced Fit for Brinker and DNA Recognition. Phys. Chem. Chem. Phys. 13，1407-1412(2) 

F. Qin, Y. Chen, M. Wu, Y. Li, J. Zhang, H. Chen* (2010) Induced Fit or Conformational Selection for RNA/U1A folding. RNA 16:1053-1061.

Y. Chen, Y. He, M. Wu, G. Yan, Y. Li, J. Zhang, H. Chen* (2010) Insight into the Stability of Cross-β Amyloid Fibril from Molecular Dynamics Simulation. Biopolymers 93: 578-586

H. Cheng, L. Jiang, M. Wu and Q. Liu (2009) Inferring Transcriptional Interactions by the Optimal Integration of ChIP-chip and Knock-out Data. Bioinformatics and Biology Insights. 3:129-140

H. Chen*, M. Wu, Z. Wang, D. Wei (2007) Insight into the Metabolism Rate of Quinone Analogues from Molecular Dynamics Simulation and 3D-QSMR Methods. Chem Biol Drug Des. 70:290–301.

Tang R*, Wei Y, Li Y, …, Wu M, …, Ma X*. Gut microbial profile is altered in primary biliary cholangitis and partially restored after UDCA therapy. Gut. 2018 Mar 1;67(3):534-41.